Teaching
Esercitazioni
Data Bases 2021/2022 – Master Degree in Bioinformatics and Computational Genomics – Prof. Daniele Braga
Basi di Dati 1 2021/2022 – Ingegneria Informatica – Prof. Stefano Ceri
Informatica A 2021/2022 – Ingegneria Matematica – Prof. Alessandro Campi
Informatica A 2017/2018 – Ingegneria Matematica – Prof. Alessandro Campi
Informatica A 2016/2017 – Ingegneria Matematica – Prof. Alessandro Campi
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New master theses proposals on viral genomics
- Detection of SARS-CoV-2 co-occurring mutations (over massive data)
2. Machine Learning methods for extracting SARS-CoV-2-related entities and feeding a knowledge graph
3. Early warning system for data-driven SARS-CoV-2 variants’ detection (big-data approach)
4. VariantHunter (small scale)
Master theses proposals on human genomics
- Integration of genomic data and metadata from cancer genomics, epigenomics, genome-wide association studies, gene expression data repositories
- Building data warehouses for fast genomic data summarization and visualization
- Using machine learning approaches to transform unstructured genomics/biomedical metadata into structured and queryable formats
- Explore semantic web technologies for genomic metadata annotation
Please feel free to contact me for further details!
Concluded theses projects
- Progettazione e realizzazione di una procedura di integrazione per dati genomici
- Ontology-driven metadata enrichment for genomic datasets
- Integration of DNA variation data into a GDM repository and API development for identification of genomic populations
- Automatic data integration for genomic metadata through sequence-to-sequence models
- Integration of genome-wide association studies into the GeCo repository
- Gene quantification datasets: transformation and integration
- Data visualization mehtods for SARS-CoV-2 mutation data